在许多学科中,异质治疗效果(HTE)的估计至关重要,从个性化医学到经济学等等。在随机试验和观察性研究中,随机森林已被证明是一种灵活而有力的HTE估计方法。尤其是Athey,Tibshirani和Wager(2019)引入的“因果森林”,以及包装GRF中的R实施。 Seibold,Zeileis和Hothorn(2018)引入了一种称为“基于模型的森林”的相关方法,该方法旨在随机试验,并同时捕获预后和预测变量的效果,并在R包装模型中进行模块化实现。 。在这里,我们提出了一种统一的观点,它超出了理论动机,并研究了哪些计算元素使因果森林如此成功,以及如何将它们与基于模型的森林的优势融合在一起。为此,我们表明,可以通过相同的参数和L2损耗下加性模型的模型假设来理解这两种方法。这种理论上的见解使我们能够实施“基于模型的因果林”的几种口味,并在计算机中剖析其不同元素。将原始的因果森林和基于模型的森林与基准研究中的新混合版本进行了比较,该研究探讨了随机试验和观察环境。在随机设置中,两种方法都执行了AKIN。如果在数据生成过程中存在混淆,我们发现与相应倾向的治疗指标的局部核心是良好性能的主要驱动力。结果的局部核心不太重要,并且可以通过相对于预后和预测效应的同时拆分选择来代替或增强。
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基于森林的方法最近在非参数治疗效应估计中获得了普及。在这一工作方面,我们引入了因果生存森林,可用于在可能右估计结果的生存和观察环境中估计异质治疗效果。我们的方法依赖于正交估计方程来在不满意的情况下对审查和选择效果进行鲁棒性调整。在我们的实验中,我们发现相对于许多基线的表现良好的方法。
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There are multiple scales of abstraction from which we can describe the same image, depending on whether we are focusing on fine-grained details or a more global attribute of the image. In brain mapping, learning to automatically parse images to build representations of both small-scale features (e.g., the presence of cells or blood vessels) and global properties of an image (e.g., which brain region the image comes from) is a crucial and open challenge. However, most existing datasets and benchmarks for neuroanatomy consider only a single downstream task at a time. To bridge this gap, we introduce a new dataset, annotations, and multiple downstream tasks that provide diverse ways to readout information about brain structure and architecture from the same image. Our multi-task neuroimaging benchmark (MTNeuro) is built on volumetric, micrometer-resolution X-ray microtomography images spanning a large thalamocortical section of mouse brain, encompassing multiple cortical and subcortical regions. We generated a number of different prediction challenges and evaluated several supervised and self-supervised models for brain-region prediction and pixel-level semantic segmentation of microstructures. Our experiments not only highlight the rich heterogeneity of this dataset, but also provide insights into how self-supervised approaches can be used to learn representations that capture multiple attributes of a single image and perform well on a variety of downstream tasks. Datasets, code, and pre-trained baseline models are provided at: https://mtneuro.github.io/ .
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Logic Mill is a scalable and openly accessible software system that identifies semantically similar documents within either one domain-specific corpus or multi-domain corpora. It uses advanced Natural Language Processing (NLP) techniques to generate numerical representations of documents. Currently it leverages a large pre-trained language model to generate these document representations. The system focuses on scientific publications and patent documents and contains more than 200 million documents. It is easily accessible via a simple Application Programming Interface (API) or via a web interface. Moreover, it is continuously being updated and can be extended to text corpora from other domains. We see this system as a general-purpose tool for future research applications in the social sciences and other domains.
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In this paper we take the first steps in studying a new approach to synthesis of efficient communication schemes in multi-agent systems, trained via reinforcement learning. We combine symbolic methods with machine learning, in what is referred to as a neuro-symbolic system. The agents are not restricted to only use initial primitives: reinforcement learning is interleaved with steps to extend the current language with novel higher-level concepts, allowing generalisation and more informative communication via shorter messages. We demonstrate that this approach allow agents to converge more quickly on a small collaborative construction task.
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High content imaging assays can capture rich phenotypic response data for large sets of compound treatments, aiding in the characterization and discovery of novel drugs. However, extracting representative features from high content images that can capture subtle nuances in phenotypes remains challenging. The lack of high-quality labels makes it difficult to achieve satisfactory results with supervised deep learning. Self-Supervised learning methods, which learn from automatically generated labels has shown great success on natural images, offer an attractive alternative also to microscopy images. However, we find that self-supervised learning techniques underperform on high content imaging assays. One challenge is the undesirable domain shifts present in the data known as batch effects, which may be caused by biological noise or uncontrolled experimental conditions. To this end, we introduce Cross-Domain Consistency Learning (CDCL), a novel approach that is able to learn in the presence of batch effects. CDCL enforces the learning of biological similarities while disregarding undesirable batch-specific signals, which leads to more useful and versatile representations. These features are organised according to their morphological changes and are more useful for downstream tasks - such as distinguishing treatments and mode of action.
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Objective: Imbalances of the electrolyte concentration levels in the body can lead to catastrophic consequences, but accurate and accessible measurements could improve patient outcomes. While blood tests provide accurate measurements, they are invasive and the laboratory analysis can be slow or inaccessible. In contrast, an electrocardiogram (ECG) is a widely adopted tool which is quick and simple to acquire. However, the problem of estimating continuous electrolyte concentrations directly from ECGs is not well-studied. We therefore investigate if regression methods can be used for accurate ECG-based prediction of electrolyte concentrations. Methods: We explore the use of deep neural networks (DNNs) for this task. We analyze the regression performance across four electrolytes, utilizing a novel dataset containing over 290000 ECGs. For improved understanding, we also study the full spectrum from continuous predictions to binary classification of extreme concentration levels. To enhance clinical usefulness, we finally extend to a probabilistic regression approach and evaluate different uncertainty estimates. Results: We find that the performance varies significantly between different electrolytes, which is clinically justified in the interplay of electrolytes and their manifestation in the ECG. We also compare the regression accuracy with that of traditional machine learning models, demonstrating superior performance of DNNs. Conclusion: Discretization can lead to good classification performance, but does not help solve the original problem of predicting continuous concentration levels. While probabilistic regression demonstrates potential practical usefulness, the uncertainty estimates are not particularly well-calibrated. Significance: Our study is a first step towards accurate and reliable ECG-based prediction of electrolyte concentration levels.
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Inductive reasoning is a core component of human intelligence. In the past research of inductive reasoning within computer science, logic language is used as representations of knowledge (facts and rules, more specifically). However, logic language can cause systematic problems for inductive reasoning such as disability of handling raw input such as natural language, sensitiveness to mislabeled data, and incapacity to handle ambiguous input. To this end, we propose a new task, which is to induce natural language rules from natural language facts, and create a dataset termed DEER containing 1.2k rule-fact pairs for the task, where rules and facts are written in natural language. New automatic metrics are also proposed and analysed for the evaluation of this task. With DEER, we investigate a modern approach for inductive reasoning where we use natural language as representation for knowledge instead of logic language and use pretrained language models as ''reasoners''. Moreover, we provide the first and comprehensive analysis of how well pretrained language models can induce natural language rules from natural language facts. We also propose a new framework drawing insights from philosophy literature for this task, which we show in the experiment section that surpasses baselines in both automatic and human evaluations.
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Industry 4.0 aims to optimize the manufacturing environment by leveraging new technological advances, such as new sensing capabilities and artificial intelligence. The DRAEM technique has shown state-of-the-art performance for unsupervised classification. The ability to create anomaly maps highlighting areas where defects probably lie can be leveraged to provide cues to supervised classification models and enhance their performance. Our research shows that the best performance is achieved when training a defect detection model by providing an image and the corresponding anomaly map as input. Furthermore, such a setting provides consistent performance when framing the defect detection as a binary or multiclass classification problem and is not affected by class balancing policies. We performed the experiments on three datasets with real-world data provided by Philips Consumer Lifestyle BV.
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Quality control is a crucial activity performed by manufacturing companies to ensure their products conform to the requirements and specifications. The introduction of artificial intelligence models enables to automate the visual quality inspection, speeding up the inspection process and ensuring all products are evaluated under the same criteria. In this research, we compare supervised and unsupervised defect detection techniques and explore data augmentation techniques to mitigate the data imbalance in the context of automated visual inspection. Furthermore, we use Generative Adversarial Networks for data augmentation to enhance the classifiers' discriminative performance. Our results show that state-of-the-art unsupervised defect detection does not match the performance of supervised models but can be used to reduce the labeling workload by more than 50%. Furthermore, the best classification performance was achieved considering GAN-based data generation with AUC ROC scores equal to or higher than 0,9898, even when increasing the dataset imbalance by leaving only 25\% of the images denoting defective products. We performed the research with real-world data provided by Philips Consumer Lifestyle BV.
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